Publicaciones en las que colabora con JOSE ENRIQUE PEREZ ORTIN (72)

2024

  1. Comparison of Xrn1 and Rat1 5′ → 3′ exoribonucleases in budding yeast supports the specific role of Xrn1 in cotranslational mRNA decay

    Yeast, Vol. 41, Núm. 7, pp. 458-472

  2. The zinc-finger transcription factor Sfp1 imprints specific classes of mRNAs and links their synthesis to cytoplasmic decay

    eLife, Vol. 12

2022

  1. High-Resolution Deep Sequencing of Nascent Transcription in Yeast with BioGRO-seq

    Methods in molecular biology (Clifton, N.J.), Vol. 2477, pp. 57-70

2021

  1. A Trans-Omics Comparison Reveals Common Gene Expression Strategies in Four Model Organisms and Exposes Similarities and Differences between Them

    Cells, Vol. 10, Núm. 2

  2. Eukaryotic RNA Polymerases: The Many Ways to Transcribe a Gene

    Frontiers in Molecular Biosciences, Vol. 8

  3. Recruitment of Xrn1 to stress-induced genes allows efficient transcription by controlling RNA polymerase II backtracking

    RNA Biology, Vol. 18, Núm. 10, pp. 1458-1474

  4. Xrn1 influence on gene transcription results from the combination of general effects on elongating RNA pol II and gene-specific chromatin configuration

    RNA Biology, Vol. 18, Núm. 9, pp. 1310-1323

2019

  1. A genome-wide transcriptional study reveals that iron deficiency inhibits the yeast TORC1 pathway

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms, Vol. 1862, Núm. 9

  2. Homeostasis in the Central Dogma of molecular biology: the importance of mRNA instability

    RNA Biology, Vol. 16, Núm. 12, pp. 1659-1666

  3. Measuring RNA polymerase activity genome-wide with high-resolution run-on-based methods

    Methods, Vol. 159-160, pp. 177-182

  4. The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins

    Nature Communications, Vol. 10, Núm. 1

  5. The mRNA degradation factor Xrn1 regulates transcription elongation in parallel to Ccr4

    Nucleic acids research, Vol. 47, Núm. 18, pp. 9524-9541

  6. The telomeric Cdc13-Stn1-Ten1 complex regulates RNA polymerase II transcription

    Nucleic acids research, Vol. 47, Núm. 12, pp. 6250-6268

2018

  1. The SAGA/TREX-2 subunit Sus1 binds widely to transcribed genes and affects mRNA turnover globally

    Epigenetics and Chromatin, Vol. 11, Núm. 1

2017

  1. Asymmetric cell division requires specific mechanisms for adjusting global transcription

    Nucleic Acids Research, Vol. 45, Núm. 21, pp. 12401-12412

  2. Corrigendum to “External conditions inversely change the RNA polymerase II elongation rate and density in yeast” [Biochim. Biophys. Acta (2013) 1829(11) (1248–1255)] (S1874939913001417)(10.1016/j.bbagrm.2013.09.008)

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms

  3. Functional genomics in wine yeast: DNA Arrays and next generation sequencing

    Biology of Microorganisms on Grapes, in Must and in Wine (Springer International Publishing), pp. 573-604

  4. Modulation of protein synthesis and degradation maintains proteostasis during yeast growth at different temperatures

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms, Vol. 1860, Núm. 7, pp. 794-802

  5. Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning

    Epigenetics & chromatin, Vol. 10, Núm. 1, pp. 58

2016

  1. Biotin-genomic run-on (Bio-GRO): A high-resolution method for the analysis of nascent transcription in yeast

    Methods in Molecular Biology (Humana Press Inc.), pp. 125-139