Publicaciones en las que colabora con Sebastián Chávez de Diego (27)

2024

  1. Influence of cell volume on the gene transcription rate

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms, Vol. 1867, Núm. 1

2021

  1. Cell volume homeostatically controls the rDNA repeat copy number and rRNA synthesis rate in yeast

    PLoS Genetics, Vol. 17, Núm. 4

  2. The total mRNA concentration buffering system in yeast is global rather than gene-specific

    RNA, Vol. 27, Núm. 10, pp. 1281-1290

  3. Xrn1 influence on gene transcription results from the combination of general effects on elongating RNA pol II and gene-specific chromatin configuration

    RNA Biology, Vol. 18, Núm. 9, pp. 1310-1323

2019

  1. Homeostasis in the Central Dogma of molecular biology: the importance of mRNA instability

    RNA Biology, Vol. 16, Núm. 12, pp. 1659-1666

  2. The mRNA degradation factor Xrn1 regulates transcription elongation in parallel to Ccr4

    Nucleic acids research, Vol. 47, Núm. 18, pp. 9524-9541

2017

  1. Asymmetric cell division requires specific mechanisms for adjusting global transcription

    Nucleic Acids Research, Vol. 45, Núm. 21, pp. 12401-12412

  2. Corrigendum to “External conditions inversely change the RNA polymerase II elongation rate and density in yeast” [Biochim. Biophys. Acta (2013) 1829(11) (1248–1255)] (S1874939913001417)(10.1016/j.bbagrm.2013.09.008)

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms

  3. Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning

    Epigenetics & chromatin, Vol. 10, Núm. 1, pp. 58

  4. The ribosome assembly gene network is controlled by the feedback regulation of transcription elongation

    Nucleic Acids Research, Vol. 45, Núm. 16, pp. 9302-9318

2016

  1. Growth rate controls mRNA turnover in steady and non-steady states

    RNA Biology, Vol. 13, Núm. 12, pp. 1175-1181

  2. The cellular growth rate controls overall mRNA turnover, and modulates either transcription or degradation rates of particular gene regulons

    Nucleic Acids Research, Vol. 44, Núm. 8, pp. 3643-3658

  3. The importance of controlling mRNA turnover during cell proliferation

    Current Genetics, Vol. 62, Núm. 4, pp. 701-710

2014

  1. Cytoplasmic 5'-3' exonuclease Xrn1p is also a genome-wide transcription factor in yeast

    Frontiers in Genetics, Vol. 5, Núm. FEB

  2. Erratum: A Complete Set of Nascent Transcription Rates for Yeast Genes (PLoS ONE (2010) 5:11 (e15442) DOI:10.1371/journal.pone.0015442)

    PLoS ONE

2013

  1. Eukaryotic mRNA decay: Methodologies, pathways, and links to other stages of gene expression

    Journal of Molecular Biology, Vol. 425, Núm. 20, pp. 3750-3775

  2. External conditions inversely change the RNA polymerase II elongation rate and density in yeast

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms, Vol. 1829, Núm. 11, pp. 1248-1255

  3. What do you mean by transcription rate?: The conceptual difference between nascent transcription rate and mRNA synthesis rate is essential for the proper understanding of transcriptomic analyses Insights & Perspectives J. E. Pérez-Ortín et al.

    BioEssays, Vol. 35, Núm. 12, pp. 1056-1062

  4. XGene expression is circular: Factors for mRNA degradation also foster mRNA synthesis

    Cell, Vol. 153, Núm. 5, pp. 1000

2012

  1. Genome-wide studies of mRNA synthesis and degradation in eukaryotes

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms, Vol. 1819, Núm. 6, pp. 604-615