Publications by the researcher in collaboration with Iñaki Comas Espadas (16)

2024

  1. VIPERA: Viral Intra-Patient Evolution Reporting and Analysis

    Virus Evolution, Vol. 10, Núm. 1

2023

  1. Genomic analysis of Mycobacterium brumae sustains its nonpathogenic and immunogenic phenotype

    Frontiers in Microbiology, Vol. 13

2022

  1. Erratum: The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation (PLoS Pathog (2022) 18:7 (e1010631) DOI: 10.1371/journal.ppat.1010631)

    PLoS Pathogens

  2. Persistent SARS-CoV-2 infection with repeated clinical recurrence in a patient with common variable immunodeficiency

    Clinical Microbiology and Infection

2021

  1. Evolutionary and Phenotypic Characterization of Two Spike Mutations in European Lineage 20E of SARS-CoV-2

    mBio, Vol. 12, Núm. 6

  2. Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim

    F1000Research, Vol. 10

  3. Spread of a SARS-CoV-2 variant through Europe in the summer of 2020

    Nature, Vol. 595, Núm. 7869, pp. 707-712

  4. The first wave of the COVID-19 epidemic in Spain was associated with early introductions and fast spread of a dominating genetic variant

    Nature Genetics, Vol. 53, Núm. 10, pp. 1405-1414

2020

  1. Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

    Eurosurveillance, Vol. 25, Núm. 32

2016

  1. Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages

    Nature Genetics, Vol. 48, Núm. 12, pp. 1535-1543

2014

  1. Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis

    Nature, Vol. 514, Núm. 7253, pp. 494-497

2013

  1. Mapping of genotype-phenotype diversity among clinical isolates of Mycobacterium tuberculosis by sequence-based transcriptional profiling

    Genome Biology and Evolution, Vol. 5, Núm. 10, pp. 1849-1862

  2. Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee

    Emerging Infectious Diseases, Vol. 19, Núm. 6, pp. 969-976

  3. Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans

    Nature Genetics, Vol. 45, Núm. 10, pp. 1176-1182

2012

  1. Two new rapid SNP-typing methods for classifying mycobacterium tuberculosis complex into the main phylogenetic lineages

    PLoS ONE, Vol. 7, Núm. 7

2011

  1. Quantifying nonvertical inheritance in the evolution of legionella pneumophila

    Molecular Biology and Evolution, Vol. 28, Núm. 2, pp. 985-1001