Evolución y salud: evolución experimental y epidemiología
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Swiss Tropical and Public Health Institute
Basilea, SuizaPublicaciones en colaboración con investigadores/as de Swiss Tropical and Public Health Institute (25)
2021
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Mycobacterium tuberculosis complex lineage 5 exhibits high levels of within-lineage genomic diversity and differing gene content compared to the type strain h37rv
Microbial Genomics, Vol. 7, Núm. 7
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Phylogenomics of mycobacterium africanum reveals a new lineage and a complex evolutionary history
Microbial Genomics, Vol. 7, Núm. 2, pp. 1-14
2019
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Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complex
Nature Communications, Vol. 10, Núm. 1
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Genomic determinants of speciation and spread of the Mycobacterium tuberculosis complex
Science Advances, Vol. 5, Núm. 6
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Molecular epidemiology and whole genome sequencing analysis of clinical Mycobacterium bovis from Ghana
PLoS ONE, Vol. 14, Núm. 3
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Reference set of Mycobacterium tuberculosis clinical strains: A tool for research and product development
PLoS ONE, Vol. 14, Núm. 3
2018
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A new phylogenetic framework for the animal-adapted mycobacterium tuberculosis complex
Frontiers in Microbiology, Vol. 9, Núm. NOV
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Comparative genomics of Mycobacterium africanum Lineage 5 and Lineage 6 from Ghana suggests distinct ecological niches
Scientific Reports, Vol. 8, Núm. 1
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Low sensitivity of the MPT64 identification test to detect lineage 5 of the Mycobacterium tuberculosis complex
Journal of Medical Microbiology, Vol. 67, Núm. 12, pp. 1718-1727
2017
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Reversion of antibiotic resistance in Mycobacterium tuberculosis by spiroisoxazoline SMARt-420
Science, Vol. 355, Núm. 6330, pp. 1206-1211
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Tuberculosis in Swiss captive Asian elephants: Microevolution of Mycobacterium tuberculosis characterized by multilocus variable-number tandem-repeat analysis and whole-genome sequencing
Scientific Reports, Vol. 7, Núm. 1
2016
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Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages
Nature Genetics, Vol. 48, Núm. 12, pp. 1535-1543
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Standard genotyping overestimates transmission of mycobacterium tuberculosis among immigrants in a low-incidence country
Journal of Clinical Microbiology, Vol. 54, Núm. 7, pp. 1862-1870
2015
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DNA replication fidelity in Mycobacterium tuberculosis is mediated by an ancestral prokaryotic proofreader
Nature Genetics, Vol. 47, Núm. 6, pp. 677-681
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In vivo biosynthesis of terpene nucleosides provides unique chemical markers of mycobacterium tuberculosis infection
Chemistry and Biology, Vol. 22, Núm. 4, pp. 516-526
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Tracking a tuberculosis outbreak over 21 years: Strain-specific single-nucleotide polymorphism typing combined with targeted whole-genome sequencing
Journal of Infectious Diseases
2014
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KvarQ: Targeted and direct variant calling from fastq reads of bacterial genomes
BMC Genomics, Vol. 15, Núm. 1
2013
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A New Method for Extracting Skin Microbes Allows Metagenomic Analysis of Whole-Deep Skin
PLoS ONE, Vol. 8, Núm. 9
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Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee
Emerging Infectious Diseases, Vol. 19, Núm. 6, pp. 969-976
2012
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Beijing sublineages of Mycobacterium tuberculosis differ in pathogenicity in the guinea pig
Clinical and Vaccine Immunology, Vol. 19, Núm. 8, pp. 1227-1237