Aplicación de topología molecular a la predicción de la actividad frente a Trypanosoma brucei rhodesiense de compuestos bicíclicos derivados de la 4-metilpiperazina

  1. Bretón Martínez, José Rafael
  2. Torrico Ovando, Cinthia Delma
  3. Torrico Ovand, Nayra
  4. Gálvez Llompart, María
  5. Gálvez Álvarez, Jorge
Aldizkaria:
Nereis: revista iberoamericana interdisciplinar de métodos, modelización y simulación

ISSN: 1888-8550

Argitalpen urtea: 2015

Zenbakia: 7

Orrialdeak: 27-38

Mota: Artikulua

Beste argitalpen batzuk: Nereis: revista iberoamericana interdisciplinar de métodos, modelización y simulación

Laburpena

Trypanosoma brucei rhodesiense causes the most virulent form of sleeping sickness in East Africa. Without treatment this disease has a fatal course. Currently, there are only five drugs in use and only one of them (melarsoprol) is effective in the final stage of the disease. To find new drugs with anti-trypanosomal activity, it has been developed a mathematical model based on molecular topology aimed at finding novel active compounds from a group of bicyclic derivatives of 4-methylpiperazine. Using linear discriminant analysis it was found a model that could correctly classify the activity of 93% of 32 compounds studied. In order to predict the antiparasitic activity, a multilinear regression analysis was carried out so that it was able to explain 86% of the variance. The validation of this model was made by cross-validation and a test of randomness. Finally, the selected model was applied to the search for new bicyclic compounds potentially active.

Erreferentzia bibliografikoak

  • A. Taladriz, A. Healy, E. J. Flores Pérez, V. Herrero García, C. Ríos Martínez, A. A. Alkhalsi et al. Synthesis and structure-activity analysis of new phosphonium salts with potent activity against african trypanosomes, J Med Chem 55(6) (2012) 2.606-2.622.
  • V. Lutje, J. Seixas y A. Kennedy. Chemoterapy for second-stage Human African trypanosomiasis, Cochrane Database Syst Rev 8 (2010) CD006201. DOI:10.1002/14651858.CD006201.
  • B. B. Trunz, R. Jędrysiak, D. Tweats, R. Brun, M. Kaiser, J. Suwiński et al. 1-Aryl-4-nitro-1H-imidazoles, a new promising series for the treatment of human African trypanosomiasis, Eur J Med Chem 46 (2011) 1.524-1.535.
  • F. La Greca y S. Magez. Vaccination against trypanosomiasis: can it be done or is the trypanosome truly the ultimate immune destroyer and escape artist?, Hum Vaccin 7 (2011) 1.225-1.233.
  • J. Gálvez, M. Gálvez-Llompart y R. García-Doménech. Molecular topology as a novel approach for drug discovery, Expert Opin Drug Discov 7 (2012) 133-153.
  • J. Gálvez, M. Gálvez-Llompart, R. Zanni y R. García-Doménech. Molecular topology dissimilar similarities, Drug Discov Today Technol 10 (2013) e475-81.
  • M. Gálvez Llompart, M. C. Recio y R. García Doménech. Topological virtual screening: a way to find new compounds active active in ulcerative colitis by inhibiting necrosis factor -kB, Mol Divers 15(4) (2011) 917-926.
  • J. V. de Julián Ortiz, J. Gálvez, C. Muñoz-Collado, R. García Domenech y C. Gimeno Cardona. Virtual combinatorial syntheses and computational screening of new potential anti-herpes compounds, J Med Chem 42(17) (1999) 3.308-3.314
  • L. Bruno-Blanch, J. Gálvez y R. García-Domenech. Topological virtual screening: a way to find new anticonvulsant drugs from chemical diversity, Bioorg Med Chem Lett 13(16) (2003) 2.749-2.754.
  • I. Ríos-Santamarina, R. García-Domenech, J. Gálvez, J. Morcillo Esteban, P. Santamaría y J. Cortijo. Getting new bronchodilator compounds from molecular topology, Eur J Pharm Sci 22(4) (2004) 271-277.
  • J. Gálvez, R. García Domenech, M. Gómez-Lechón y J. V. Castell. Use of molecular topology in the selection of new cytostatic drugs, J Mol Theochem 504 (2000) 241-248.
  • C. de Gregorio Alapont, R. García-Doménech, J. Gálvez, M. J. Ros, S. Wolski y M. D. García. Molecular topology: a useful tool for the search of new antibacterials. Bioorg Med Chem Lett 10(17) (2000) 2033-6.
  • L. Pastor, R. García Domenech, J. Gálvez, S. Wolski y M. D. García. New antifungals selected by molecular topology, Bioorg Med Chem Lett 8(18) (1998) 2.577-2.582.
  • N. Mahmoudi, J. V. de Julian-Ortiz, L. Cicerón, J. Gálvez, D. Mazier, M. Danis et al. Identificacion of new antimalarial drugs by linear discriminant analysis and topological virtual screening, J Antimicrob Chemother 57(3) (2006) 489-497.
  • N. Mahmoudi, R. García Doménech, J. Gálvez, K. Farhati, J. F. Franetich, R. Sauerwein et al. New active drugs against liver stages of Plasmodium predicted by molecular topology, Antimicrob Agents Chemother 52 (2008) 1.215-2.
  • M. Gálvez-Llompart, R. Zanni y R. García-Doménech. Modeling natural anti-inflammatory compounds by molecular topology, Int J Mol Sci 12 (2011), 9.481-9.503.
  • M. J. Duart, R. García-Domenech, G. M. Antón-Fos y J. Gálvez. Optimization of a mathematical topological pattern for the prediction of antihistaminic activity, J Comput Aided Mol Des 15(6) (2001) 561-572.
  • M. A. Martínez Rodríguez, R. J. Seguí López-Peñalver, G. Alcácer Tomás, J. Gálvez Alvarez, M. Gálvez-Llompart y R. García-Domenech. Aplicación de la topología molecular a la predicción y optimización de la actividad repelente de mosquitos de derivados de la N-acylpiperidina, Nereis 6 (2014) 19-26.
  • T.J. Schmidt, A. M. Nour, S. A. Khalid, M. Kaiser y R. Brun. Quantitative structure-antiprotozoal activity relationships of sesquiterpene lactones, Molecules 14(6) (2009) 2.062-2.076
  • B. Guzmán Fernández, R. Zanni, M. Gálvez Llompart y R. García Doménech. Aplicación de la topología molecular en la búsqueda de nuevos compuestos derivados del 4-nitro-imidazol activos frente al Trypanosoma brucei. An Real Acad Farm 78(4) (2012) 511-526.
  • T. J. Schmidt, F. B. da Costa, N. B. Lopes, M. Kaiser y R. Brun. In silico prediction and experimental evaluation of furanoheliangolide sesquiterpene lactones as potent agents against Trypanosoma brucei rhodesiense, Antimicrob Agents Chemother 58 (2014) 325-332.
  • J. Faist, W. Seebacher, R. Saf, R. Brun, M. Kaiser y R. Weis. New N-methylpiperazinyl derivates of bicyclic antiprotozoal compounds, Eur J Med Chem 47 (2012) 510-519.
  • L. B. Kier, L.H. Hall, Molecular Connectivity in Chemistry and Drug Research, Academic Press, London (1976). [24] L. B. Kier, L. H. Hall, Molecular Connectivity in Structure-Activity Analysis. Wiley, New York (1986). [25] J. Galvez, R. García-Domenech, M. T. Salabert y R. Soler. Charge indexes. New topological Descriptors, J Chem Inf Comput Sci 34 (1994) 520-525.
  • H. J. Wiener. Structural determination of paraffin boiling points, Journal of the American Chemical Society 69(1) (1947) 17-20.
  • DESMOL11 Software. Unidad de Investigación de Diseño de Fármacos y Conectividad Molecular. Facultad de Farmacia Universitat de Valéncia, Spain.
  • R. García-Doménech, W. López-Peña, Y. Sánchez-Perdomo, J. R. Sanders, M. M. Sierra-Araujo y C. Zapata et al. Application of molecular topology to the prediction of the antimalarial activity of a group of uracil-based acyclic and deoxyuridine compounds, Int J Pharm 363(1-2) (2008) 78-84.
  • Statistica 8.0 (2008) Statsoft Inc http://www.statsoft.com.